Resources · Claude connector

Claude Synapse.org connectorWhat Claude can find in Synapse.org for your research.

The Claude Synapse.org connector exposes 5 tools, 5 in read and 0 in write. Claude searches Synapse, opens a project, folder or file record, reads its annotations and provenance, and walks a project's tree. It works on metadata, and Synapse's data-use terms still apply.

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Overview

What changes when Claude can search Synapse

Synapse's directory description is about discovering datasets from collaborative research projects and understanding what they contain before you download. With the connector, you describe what you are looking for and Claude does the browsing: it searches, opens the records that match and reads their metadata and provenance, so you know what a dataset holds before downloading anything.

Shortlisting datasets for a question. You describe the data you need, and Claude runs search_synapse with keyword and type filters and returns the matching entities.

Understanding a project before requesting files. Claude walks the folders of a project with get_entity_children, then opens a record with get_entity and reads the custom fields curators attached to it through get_entity_annotations.

Checking where a file comes from. get_entity_provenance retrieves the activity recorded for an entity, optionally for one version.

What it will not do: no tool on the sheet downloads files or uploads anything; the connector stays on metadata. Nothing runs by itself either: Claude searches while it answers you. And Synapse's own terms prohibit redistributing data, which its documentation says can include use by an outside AI provider. The Claude connectors hub lists the other life-science connectors, and the Integrations page covers automation platforms.

Vocabulary

Five words before you connect

The Claude vocabulary behind this connector, in one minute.

Connector
The link you set up once between Claude and an account you already hold, so Claude can work with it while it answers you.
Tool
One named thing the connector lets Claude do on that account. Claude chooses the ones it needs, and the directory lists them by name.
Authorization
The Synapse sign-in screen, opened in your browser, where you grant Claude the access it will use. Given once per person, and revocable.
Approval
The confirmation Claude waits for before it goes ahead with something that changes an account, shown in the chat at the right time.
MCP
The shared standard behind connectors: it is what lets an assistant such as Claude talk to an outside service like Synapse.
Connect

Connecting Synapse.org to Claude in three steps

  1. 01

    Find Synapse.org in Claude

    Open Claude's settings, go to Customize then Connectors, and look for Synapse.org. On a Team or Enterprise workspace, an Owner or Primary Owner first enables it before members can sign in one by one.

  2. 02

    Start the connection

    Click Connect on its row. Synapse's documentation describes a browser-based login: a Synapse window opens and you sign in with your Synapse account. If the link breaks later, use Disconnect and connect again.

  3. 03

    Read the authorization screen

    Check the authorization screen before you accept. It is Synapse's screen, not Claude's, and it sets what the access covers. You can also remove that access later from your Synapse account.

Tools

The 5 Synapse.org tools, sorted by what they do

Synapse.org gives Claude 5 tools: 5 that read your account, 0 that change something in it.

All five consult Synapse metadata, and the server's documentation describes each one. Names stay as Claude shows them.

  • 5 read

What Claude reads (5)

5 tools

Five tools that look up records, their fields and their history, without touching the data.

get_entity

Returns the core metadata of one Synapse entity from its ID, so Claude knows what that record is before going any further.

When it helps
you have a Synapse ID and want to know what that record actually is.
Watch out
it needs the ID; for a topic, Claude starts with the search tool instead.

Sourcegithub.com · October 1, 2026 ↗

get_entity_annotations

Brings back the custom annotations attached to an entity: the extra fields its curators chose to record so that others can tell what the data describes.

When it helps
you want to see the custom fields recorded on a dataset before asking for access.

Sourcegithub.com · October 1, 2026 ↗

get_entity_provenance

Retrieves the provenance, meaning the activity recorded for how an entity was produced, and can target one specific version of it instead of the latest.

When it helps
you need to know how a file was produced, for one specific version.

Sourcegithub.com · October 1, 2026 ↗

get_entity_children

Lists what sits inside a container entity, such as the folders and files of a project, so Claude can walk its structure level by level.

When it helps
you want the layout of a project before deciding which folder to open.
Watch out
it applies to containers like projects and folders, not to a single file.

Sourcegithub.com · October 1, 2026 ↗

search_synapse

Looks for Synapse entities by keyword, narrowed if needed by name, type or parent, and returns results that Synapse provides as data custodian.

When it helps
you want the public datasets on a given topic, filtered by type or parent.
Watch out
attribution and licensing follow each entity's own metadata, so check them per result.

Sourcegithub.com · October 1, 2026 ↗

Approvals

What Claude asks before acting

By default, Claude stops and asks for your go-ahead before any action it takes on an account in your place. The request shows up in the conversation when it matters.

On Team and Enterprise workspaces, owners decide whether a member may let some actions through without being asked every time. They can also bound what a connector may do for the whole organisation, keeping reads and closing writes for instance, and nobody bypasses that from their own account. Claude also works with your rights only: Synapse's documentation says the login is used when the agent needs protected resources, so what your Synapse account cannot open stays closed to Claude too.

Plans

Which plans include it

None of the 819 sheets in the official directory displays availability by plan. Connector by connector, the answer is published nowhere: it is a real gap in the catalogue.

What is published is the general rule: remote connectors are open to all users on Claude, Cowork, Claude Desktop and mobile. On Team and Enterprise, an Owner or Primary Owner enables the connector for the organisation before each member signs in. For the current state of this one, check its sheet in the official directory. Note that only Synapse's own documentation covers it; no Claude help article does.

Limits

Where the Claude Synapse.org connector stops

A connector is not an automation. Claude calls these tools while it answers you: nothing fires when a new dataset is released or a project gains files.

The tool list is an observed floor, not a promise: an administrator can open actions that no public sheet shows. By default, this sheet exposes reads only. The partner badge in the directory is not a security audit, and Anthropic says on every sheet that it does not choose the tools a publisher exposes and cannot guarantee they behave as announced. The directory sheet itself reminds users to read Anthropic's data-handling policies before connecting.

Need help

Need help connecting Synapse.org to Claude?

A person reads every message.

FAQ

Questions about the Claude Synapse.org connector

01What can Claude do with the Synapse.org connector?
Claude can search and inspect scientific datasets on Synapse while it answers you. Its five tools search entities by keyword with name, type or parent filters, fetch the core metadata of an entity from its ID, return its custom annotations, list the children of a project or folder, and retrieve the provenance recorded for an entity or one of its versions. Synapse's documentation describes each tool. The connector works on metadata, not on the content of files.
02Can Claude upload or edit data in Synapse?
Not with the tools the directory sheet shows. All five are lookups: search, entity metadata, annotations, children and provenance. None is described as adding, editing or deleting anything in Synapse, and none downloads files either. That is an observed floor rather than a hard guarantee, since an administrator can open actions that no public sheet displays. If an action that changes an account ever appears, Claude's default rule is to ask you before it runs.
03Does Claude ask before querying Synapse?
By default, Claude asks for confirmation before any action it takes on an account in your place. No source describes a confirmation specific to the Synapse tools, so that default rule is what applies to all five. In an organisation workspace, owners decide whether members may let some actions through without a new prompt, and they can also restrict what the connector may do for everyone or switch it off entirely.
04Which Claude plans include the Synapse.org connector?
No official source publishes plan availability connector by connector, and none of the 819 directory sheets shows it. The general rule says remote connectors are open to all users on Claude, Cowork, Claude Desktop and mobile, with an Owner or Primary Owner enabling them first on Team and Enterprise. Synapse's own documentation names no Claude plan. Only the connector's sheet in the directory shows its current state for your account.
05Does Claude see every dataset on Synapse?
No, Claude works with the access your Synapse login gives it. Synapse's documentation explains that you are asked to sign in when the agent needs protected resources, so controlled datasets your account cannot open stay out of reach. Search results are provided by Synapse as data custodian, with attribution and licensing set by each entity's metadata. An owner of your Claude workspace can also restrict what the connector is allowed to do.
06Is it safe to send Synapse data to Claude under the terms of use?
It depends on your setup and the datasets involved, so check both of them carefully before you connect. Synapse's documentation warns that its terms prohibit redistributing data, which may include storage or use by third-party AI providers, and advises avoiding consumer AI services that may store or train on data. The directory sheet adds that you remain responsible for data-use restrictions and it points to Anthropic's data-handling policies for consumer and commercial accounts.
07Claude or an automation tool for Synapse.org?
They do different jobs, so it depends on the use. Claude with this connector answers an exploratory question in the moment: which datasets exist, what a project contains, where a file came from. An automation platform runs scheduled or event-driven workflows without anyone asking, such as a recurring sync of records. This site has no n8n, Make or Zapier page for Synapse, so the Claude connector is the route described here.